Jul 2026· Current Opinion in Chemical Biology· Vol 94, pp.
102728
· 1 citation· 83 references
Medicine
TL;DR
It is argued that generative AI models now have the maturity to create and optimize enzymes for industrial applications and can speed up the development of biocatalysts and serve as a community assessment to inform the next generation of models.
Abstract
Sparked by innovations in generative artificial intelligence (AI), the field of protein design has undergone a paradigm shift with an explosion of new models for optimizing existing enzymes or creating them from scratch. After more than one decade of low success rates for computationally designed enzymes, generative AI models are now frequently used for designing proficient enzymes. Here, we provide a comprehensive overview and classification of generative AI models for enzyme design, highlighting models with experimental validation relevant to real-world settings and outlining their respective limitations. We argue that generative AI models now have the maturity to create and optimize enzymes for industrial applications. Wider adoption of generative AI models with experimental feedback loops can speed up the development of biocatalysts and serve as a community assessment to inform the next generation of models.
The foundation of polymer databases is built upon to critically examine the performance and applicability of current encoding strategies across different use cases and focuses on two major AI application domains, property prediction and inverse design, to evaluate the strengths, weaknesses and suitable scenarios for va...
This review examines enzyme engineering from classical methods to AI-assisted biocatalyst development, highlighting key advances, challenges, and emerging trends in autonomous laboratories, sustainable biocatalysis, and computational protein design.
Mati Ullah, M. Rizwan, Vivian Andoh et al.· Journal of Agricultural and...· 0 citations
Results indicate that supervised machine learning can help guide the construction of high-value enzyme libraries with expanded catalytic scope, and suggest that supervised machine learning can help guide the construction of high-value enzyme libraries with expanded catalytic scope.
Ravi G. Lal, Jason Yang, Zi-Yan Zhang et al.· bioRxiv· 0 citations
Synthetic biology applies engineering principles to the rational design of biological systems with the aim of producing predictable and tunable behaviour. Although the field's conceptual foundations and core technologies are well established, the recent simultaneous maturation of Quality by Design (QbD), artificial int...
Carlos Belloch-Molina, Francisco Vitor Santos da Silva, John P. Morrissey et al.· Biotechnology Advances· 0 citations
An AI–robotics platform integrating rank-guided learning with closed-loop enzyme engineering that improves two enzymes by 57- and 104-fold is presented.
Jingyi Xu, Yan Zheng, Rajamanikandan Sundarraj et al.· Nature Communications· 1 citation
These tools can be used by chemists to test new ideas, make the most of existing open-source software and rapidly develop custom solutions that significantly ease day-to-day work.
Didier Mathieu· AI Chemistry· 0 citations
We use cookies to run the site and, with your consent, for analytics and to show ads.
See our Cookie Policy.