This experiment exposes an extremely fruitful usage pattern for AI in science: translating results between different communities and application domains, accelerating the process by which serendipitous discoveries in a field become paradigm-shifting breakthroughs in another.
Abstract
Mapping an atomic structure to a compact set of geometric descriptors is an essential step in any machine-learning application to atomic-scale modeling. A powerful and widely-used approach can be understood as a discretization of the histogram of pair distances, triangles, etc., that results in a hierarchy of symmetry-invariant atom-centered descriptors. Unfortunately, the lower rungs on this hierarchy (two, three, four-neighbor clusters) were found to be incomplete, with symmetry-unrelated pairs of structures having exactly the same descriptors. However, all the ``descriptor degeneracies''reported so far are resolved by considering larger clusters of neighbors to build the descriptors. We report examples of 3D structures that are indistinguishable even if one considers clusters of up to seven neighbors, and to arbitrary order when considering a practical level of discretization of the descriptors, discovered with the assistance of large language models. The key ingredients in their construction can be traced to results that have been known for decades in different communities; the model was able to find the references and recognize their significance for the problem at hand. We believe this experiment exposes an extremely fruitful usage pattern for AI in science: translating results between different communities and application domains, accelerating the process by which serendipitous discoveries in a field become paradigm-shifting breakthroughs in another.
A NEP-style descriptor-radial Chebyshev moments plus contracted spherical-harmonic (S-vector) invariants-is computed per type block, and the model classifies each atom into one of 271 AFLOW crystal structure prototypes or the amorphous class.
Coupled-cluster theory defines the accuracy standard for molecular electronic-structure properties but scales too steeply for routine application, whereas density-functional theory is affordable yet systematically biased. We resolve this trade-off with a single equivariant network, HARP (Hamiltonian Read-out for Proper...
A notably simple procedure, a method the authors refer to as deletions, yields superior performance over an array of alternative extraction methods for extracting atomic environments from large, bulk configurations and embedding them into smaller configurations suitable for DFT calculations with periodic boundary condi...
Jared Stimac, Fei Zhou, Kyle Bushick et al.· 0 citations
SALTED provides an open-source Python package for machine learning the quantum-mechanical electron density in molecular and condensed-phase systems based on input atomic coordinates and species, based on a linear atom-centered decomposition of the electron density.
Zekun Lou, Alan M. Lewis, T. Bernhard et al.· 0 citations
The comparison of protein structures is necessary to determine molecular functions and evolutionary relationships and can also facilitate drug design and the prediction of separation options. The number of available protein structures is rapidly increasing, driven by experimental determination but also prediction metho...
M. Fernández-Giro, J. Emonts, B. Berkels et al.· bioRxiv· 0 citations
Learn how Google DeepMind and GovTech Singapore uses lightweight on-device Gemma models to intercept conversational scams in private chats with zero cloud data egress.
Microsoft Research Blog· microsoft.comOct 12, 2026
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