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protein folding

2,550 papers

#protein folding Open access Aug 2026

Development and validation of machine learning models for 30-day mortality prediction in septic shock

The RF model based on six readily available laboratory parameters accurately predicts 30-day mortality in septic shock patients, however, the findings are limited by the single-center retrospective design and lack of external validation, warranting further multi-center studies to confirm generalizability.

Shan-Bi Chang, Yue-Bang Wang, Zi-Jin Zhang et al. · 0 citations
#protein folding Open access Aug 2026

Nanoindentation-Informed Skin Bilayer Modeling Links Stiffness Heterogeneity to Curvature Localization Under Glycation and Carbonyl Stress

It is suggested that spatial stiffness heterogeneity, rather than stiffening alone, contributes to predicted curvature localization in skin surrogate bilayers and may provide a mechanics-based readout for evaluating prospective cosmetic interventions.

Yiwen Li, Feng Cao, Qian-Wen Fan et al. · 0 citations
#protein folding Aug 2026

Development and ICH M10-compliant validation of an LC-MS/MS method for quantification of atirmociclib in mouse plasma and its application to preclinical pharmacokinetic studies.

The first validated liquid chromatography tandem mass spectrometry (LC-MS/MS) bioanalytical method for the quantification of atirmociclib in mouse plasma is reported, validated in compliance with international council for harmonisation-M10 (ICH-M10) guidelines.

Ashwani Gaur, U. Patel, Ashutosh Gavali et al. · 0 citations
#protein folding Open access Aug 2026

Uremic Serum Alters Gene Expression Profiles and Signaling Pathway Activity in Porcine Arterial Smooth Muscle Cells

The signaling pathways that regulate cellular redox homeostasis, the cellular waste disposal system, ER stress and autophagy are major signaling pathways involved in aSMCs’ responses to uremic serum exposure, which may contribute to the severe arterial-specific clinical symptoms observed in CKD/ESKD patients.

You-You Zheng, Kent A. Lee, U. Uriyanghai et al. · 0 citations
#protein folding Open access Aug 2026

Novel compound heterozygous SIL1 variants associated with Marinesco-Sjögren syndrome in a Chinese family

Structural prediction and coimmunoprecipitation indicate that the compound variants may be associated with the development of MSS by weakening SIL1-BiP binding, and preliminary functional evidence that the identified variants may affect SIL1 abundance and SIL1-BiP interaction, supporting their relevance to the MSS phen...

Yi-Zheng Jiang, Ao-Jie Lian, Jia-Ling Guo · 0 citations
#protein folding Open access Aug 2026

DepPrior: integrating CRISPR dependency predictability with multi-omics reproducibility to prioritize candidate LUAD therapeutic targets

Findings support DepPrior as a reproducibility-oriented, hypothesis-generating approach for target nomination for lung adenocarcinoma targets by requiring concordant evidence of CRISPR dependency separability, molecular predictability, and cross-cohort expression/protein reproducibility.

Feng-Fei Zhou, Cheng Wang, Li-Zhi Mo et al. · 0 citations
#protein folding Open access Aug 2026

Stable Constitutive BiP Expression Prolongs Late-Stage GLP-1–Fc Accumulation in CHO Cells

Stable constitutive expression of host-derived BiP was associated with prolonged late-stage GLP-1–Fc accumulation in the producer population examined, and these kinetics are compatible with a model in which the timing of ER chaperone supply influences the maintenance of productive output.

R. R. Shaifutdinov, Fedor A. Krukov, Anastasia S. Samok et al. · 0 citations

Precision Design of Fluorogenic Probes via Orthogonal Tuning of Binding and Photophysics for Isoform-Selective ALDH2 Imaging.

A5 is developed, a fluorogenic substrate for aldehyde dehydrogenase 2 (ALDH2) that exhibits high isoform selectivity and a >240-fold signal enhancement over the standard NADH assay, and enables quantitative imaging of ALDH2 activity across multiple biological scales.

Rongrong Tao, Yu Chen, Taorui Yang et al. · 4 citations
#protein folding Jun 2025

Unraveling the Efficacy of AR Antagonists Bearing N-(4-(Benzyloxy)phenyl)piperidine-1-sulfonamide Scaffold in Prostate Cancer Therapy by Targeting LBP Mutations.

LT16 outperformed existing antiandrogens by fully antagonizing clinical AR mutations and effectively suppressing castration- and enzalutamide-resistant LNCaP cells proliferation in vitro and in vivo, positioning it as a promising and innovative therapeutic for advanced PCa.

Xin Chai, Xinyue Wang, Lvtao Cai et al. · 2 citations

PepBAN: A Deep Learning Framework with Bilinear Attention and Adversarial Learning for Peptide-Protein Interaction Prediction

PepBAN is introduced, a deep learning framework for modeling PepPI predictions that effectively learns the pattern of pairwise local interactions, enables the identification of key residues participating in the peptide-protein interactions, and offers an intuitive approach to interpret the underlying mechanisms of PepP...

Shuaiyan Li, Xiaorui Wang, Yuchen Zhu et al. · 4 citations

PepPCBench is a Comprehensive Benchmarking Framework for Protein-Peptide Complex Structure Prediction

PepPCBench enables a robust evaluation of PFNN-based methods and supports their continued development for peptide-protein structure prediction, and highlights the influence of peptide length, conformational flexibility, and training set similarity on prediction accuracy.

Si-Long Zhai, Huifeng Zhao, Ji-Ke Wang et al. · 13 citations · ⚡1

From tech blogs

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Google DeepMind Blog Sep 30, 2026

Introducing SynthID Bio

Proof of concept for watermarking AI-generated proteins while preserving biological function.

MIT News · Artificial Intelligence Aug 27, 2026

Looking beyond natural sequences

A new machine-learning framework aims to improve the success rate of computational protein design while moving away from results that reproduce sequences found in nature.

Google DeepMind Blog Nov 25, 2025

AlphaFold: Five years of impact

Explore how AlphaFold has accelerated science and fueled a global wave of biological discovery.

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