Sep 2026· Current Opinion in Ophthalmology· Vol 37, pp. 413-420· 0 citations· 55 references
Medicine
Abstract
Purpose
OF REVIEW
This review surveys recent advances in artificial intelligence-guided small molecule discovery and gene therapy, with a focus on generative and foundation models, and their translational applications to ophthalmic therapeutics.
RECENT
Findings
A unifying theme across recent work is the shift from artificial intelligence as a screening tool to artificial intelligence as an engine for generative design. In small molecule discovery, reinforcement learning and diffusion-based generative models are producing structurally novel candidates for ophthalmic indications with demonstrated preclinical efficacy, while structure-based approaches leveraging AlphaFold and co-folding models are improving target identification and virtual screening. In gene therapy, artificial intelligence-guided AAV capsid engineering has yielded vectors with improved retinal transduction efficiency in nonhuman primates. Complementing this, deep learning models trained on chromatin accessibility data are enabling de novo design of compact, cell-type-specific regulatory elements, with direct implications for the specificity and payload capacity of ocular gene therapy vectors. Artificial intelligence-guided CRISPR guide RNA optimization is further expanding the precision of gene editing-based approaches.
SUMMARY
Artificial intelligence tools may influence the landscape of ophthalmic drug discovery, from nominating small molecule candidates to co-designing next-generation gene therapy vectors. Rigorous experimental validation remains essential; artificial intelligence-nominated candidates and predictions must be tested empirically to confirm their safety, biological relevance, and therapeutic efficacy.
The role of machine learning, deep learning, foundation models, generative AI and digital twins for advancing therapeutic design, boosting vector performance, manufacturing optimization, patient stratification and enabling precision medicine is discussed.
G. Flora, Abhinay Thakur· Frontiers in Genetics· 0 citations
It is argued that clinical value will depend on closed-loop workflows in which multimodal predictions are experimentally validated, externally tested, and longitudinally updated to guide the next therapeutic decision.
K. Papavassiliou, A. Sofianidi, Angeliki Margoni et al.· International Journal of Mol...· 0 citations
In gene editing, CRISPR-Cas9 has revolutionized the field and led to advancements such as base editing and prime editing. This decade's most significant advancement was the creative convergence of these technologies with artificial intelligence (AI) techniques, particularly deep learning and large language models. The...
Hussein R. Mahmood· Middle East Research Journal...· 0 citations
A paradigm shift toward autonomous scientific agents capable of causal reasoning and end-to-end experimental guidance is highlighted, and persistent challenges are discussed, including data bias, limited interpretability, and in silico-to-wet lab translation.
This review discusses AI‐guided strategies for material design, targeting, payload optimization, and in vivo delivery, with particular attention to protein corona‐mediated biological identity, microenvironment‐responsive activation, and biodistribution modeling.
Sheng-Bin Liu, Zhi Liu, Hai-Xing Shi et al.· MedComm· 0 citations
Generative AI has driven remarkable breakthroughs in protein design, enabling the rapid, computationally guided creation of high-affinity binders against diverse targets. While remarkable experimental success has been demonstrated, the confidence metrics used to filter and evaluate designs remain optimized for static p...
Jakob R. Riccabona, Katharina T. Stonig, J. Meiler et al.· FEBS Letters· 0 citations
The “HardFlow” algorithm could help generative AI models produce high-quality outputs that obey strict requirements when “pretty close” doesn’t cut it.
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