Jul 2026· Research Square· 0 citations· 78 references
Medicine
TL;DR
The cryo-electron microscopy structure of the full-length human VPS4B hexamer in six-membered helical “spiral staircase” states suggests a mechanism for substrate-dependent hexamerization and priming of VPS4 for its ESCRT-III remodeling activity.
Abstract
Vacuolar protein sorting-associated protein 4 (VPS4), which occurs in A and B isoforms in humans, is the only enzyme in the core endosomal sorting complex required for transport (ESCRT) machinery. Human VPS4 is considered a potential therapeutic target for activation in neurodegeneration, and for inhibition in cancer and HIV-1 infection. VPS4 assembles transiently into a hexamer, which then removes ESCRT-III subunits from polymeric assemblies by unfolding them and threading them through its central pore. The N-terminal MIT domain of VPS4 binds to C-terminal MIM motifs of ESCRT-III. Here, we determined the cryo-electron microscopy structure of the full-length human VPS4B hexamer in six-membered helical “spiral staircase” states. In one of these states, two of the six MIT domains are ordered and stabilize the hexamer by bridging the seam of the spiral staircase. Residues involved in seam-bridging contacts were found to be important for biochemical and cellular activity. The structures also revealed two modes for polypeptide occupancy of the central pore, one of which involves the MIT-AAA linker peptide. These observations suggest a mechanism for substrate-dependent hexamerization and priming of VPS4 for its ESCRT-III remodeling activity.
It is found that the MI is critical for both recruitment and activation of ALAS by S. cerevisiae ClpX, and can serve both to recruit a substrate to mitochondrial ClpX and to accelerate its processing by the AAA+ motor.
Adam DeCosta, Rebekah Barrick, J. Kardon· Journal of Biological Chemis...· 0 citations
It is shown that DNAJC13 forms an unexpected antiparallel homodimeric architecture involving distinctive symmetrical interactions between composite IWN1 and α-solenoid ARM2 domains in each protomer, which provides a structural and mechanistic framework for understanding DNAJC13 function in recycling endosome control.
Tao Fu, Chan Lee, Frances V. Hundley et al.· bioRxiv· 0 citations
It is hypothesized that the ZMPSTE24E336A trap mutant reveals a normally transient isoform of IFITM3 whose transmembrane span is inverted and that ZMPSTE24 is involved in the quality control of IFITM3 topology, either inverting, correcting or assisting in removal of aberrant IFITM3 molecules.
Eric D. Spear, Khurts Shilagardi, Sonia Sarju et al.· bioRxiv· 0 citations
The results define the dynamic architecture of the Rixosome and provide a structural framework for ITS2 processing during nuclear maturation of the eukaryotic 60S ribosomal subunit.
M. Thoms, Jing-Yi Zhu, Xia-Ying Hong et al.· bioRxiv· 0 citations
The protein encoded by ORF YPL199c Etl1 (ESCRT-three-like 1) is palmitoylated and localizes to the plasma membrane, which does not appear to be associated with lipid rafts, since it could be easily extracted from the membrane by Triton X-100 treatment.
These findings uncover a conserved mechanism from yeast to humans by which TREX-2 and TREX-2.1 complexes regulate Sub2/DDX39B during nuclear mRNP maturation, providing insights into the coordination of mRNP remodeling and processing prior to nuclear export.
Alexia E. Angelos, R. Asada, Bradley P. Clarke et al.· Nucleic Acids Research· 0 citations
We use cookies to run the site and, with your consent, for analytics and to show ads.
See our Cookie Policy.